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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SNCAIP, synuclein, alpha interacting protein
Sequence ID:NM_001242935
NM_005460
RefSeqGene ID:NG_011486
Entrez Gene ID:9627
Ensembl ID:ENSG00000064692

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PARKINSON DISEASEADH1C
DBH
DRD4
FGF20
GBA
MAPT
NDUFV2
NR4A2
TBP
UCHL1

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 121726829 - 121787297


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4838145Full LengthBC094759synuclein, alpha interacting protein
5193089Full LengthBC033743synuclein, alpha interacting protein
5298588Full LengthBC040552synuclein, alpha interacting protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005451  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001242935 NP_001229864    
NM_005460 NP_005451 Q9Y6H5 Ank

Related Sequences

 
mRNAGenPeptSwissProt
AF076929 AAD30362 Q9Y6H5
BC033743 AAH33743 Q9Y6H5
BC040552 AAH40552 Q9Y6H5
BC094759 AAH94759 Q9Y6H5
DQ227317 ABB51162 Q9Y6H5
AK001617 BAA91791 Q9NVG1
AB110788 BAD19017 Q9Y6H5
AB110789 BAD19018 Q9Y6H5
AB110790 BAD19019 Q9Y6H5
AB110791 BAD19020 Q6L983
AB110792 BAD19021 Q6L982
AB110793 BAD19022 Q6L981
AB110794 BAD19023 Q6L980
AK021944 BAG51060 B3KMP8
AK298882 BAH12894 B7Z5F8
AK299687 BAH13102 B7Z616
AK304646 BAH14231 B7Z995

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNCAIP NP_005451 M.musculus Sncaip 67847 Gene Info NP_080684 87
R.norvegicus Sncaip 307309   NP_001100849 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta