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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EWSR1, Ewing sarcoma breakpoint region 1
Sequence ID:NM_013986
NM_005243
NM_001163285
NM_001163286
NM_001163287
RefSeqGene ID:NG_023240
Entrez Gene ID:2130
Ensembl ID:ENSG00000182944

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
EWING SARCOMA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 29686818 - 29696326

 Exon Info From UCSC:
NM_013986
NM_005243
NM_001163285
NM_001163286
NM_001163287

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2961279Full LengthBC000527Ewing sarcoma breakpoint region 1
3449145Full LengthBC004817Ewing sarcoma breakpoint region 1
4340116Full LengthBC011048Ewing sarcoma breakpoint region 1
6047805Full LengthBC072442Ewing sarcoma breakpoint region 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005234  NP_053733  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163285 NP_001156757    
NM_001163286 NP_001156758    
NM_001163287 NP_001156759    
NM_005243 NP_005234 Q01844 RRM_1
zf-RanBP
NM_013986 NP_053733   RRM_1
zf-RanBP

Related Sequences

 
mRNAGenPeptSwissProt
BC000527 AAH00527 Q01844
BC004817 AAH04817 Q01844
BC011048 AAH11048 Q01844
BC072442 AAH72442 Q01844
EU327511 ABY40719 A9Z0R7
AK056309 BAB71145 Q01844
AK056681 BAB71252 Q96MN4
X66899 CAA47350 Q01844
CR456490 CAG30376 Q01844
CU013087 CAK54518  
CU013375 CAK54817  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EWSR1 NP_053733 R.norvegicus Ewsr1 289752   NP_001020803 99
M.musculus Ewsr1 14030 Gene Info NP_031994 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database