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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SNAI2, Snail homolog 2 (Drosophila)
Sequence ID:NM_003068
RefSeqGene ID:NG_012130
Entrez Gene ID:6591
Ensembl ID:ENSG00000019549

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
PIEBALDISMKIT

Cytogenetic Location (from UniGene)

Cytogenetic Location:8q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 49830328 - 49833988

NM_003068 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
413124983023849831546
131318584983245449832999
185921014983374549833987

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3908245Full LengthBC014890snail homolog 2 (Drosophila)
3911047Full LengthBC015895snail homolog 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003059  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003068 NP_003059 O43623 zf-C2H2

Related Sequences

 
mRNAGenPeptSwissProt
U97060 AAB58705 O00514
BC014890 AAH14890 O43623
BC015895 AAH15895 O43623
EU446862 ABZ92391  
AK223368 BAD97088 Q53FC1
AK312661 BAG35543 O43623

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNAI2 NP_003059 M.musculus Snai2 20583 Gene Info NP_035545 96
D.melanogaster esg 34903   NP_476600 61
C.elegans K02D7.2 186874   NP_499902 57
A.gambiae AgaP_AGAP008274 1277710   XP_317196 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database

BioCarta Pathways
Pathway information courtesy of BioCarta