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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FOXC1, Forkhead box C1
Sequence ID:NM_001453
RefSeqGene ID:NG_009368
Entrez Gene ID:2296
Ensembl ID:ENSG00000054598

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
AXENFELD-RIEGER SYNDROME, TYPE 3 
IRIDOGONIODYSGENESIS, TYPE 1 

Cytogenetic Location (from UniGene)

Cytogenetic Location:6p25Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 1612576 - 1614127

NM_001453 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1344716106801614126

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9093242IncompleteBC169307forkhead box C1
9093262IncompleteBC169306forkhead box C1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001444  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001453 NP_001444 Q12948 Fork_head

Related Sequences

 
mRNAGenPeptSwissProt
U13221 AAA92038 Q12948
BC134421 AAI34422 A3KPE3
BC169306 AAI69306  
BC169307 AAI69307  
L12143 AAK13575 Q12948

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FOXC1 NP_001444 M.musculus Foxc1 17300 Gene Info NP_032618 95
R.norvegicus Foxc1 364706   XP_002728515 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)