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Gene Info

Gene Information For:Hs. PDX1, Pancreatic and duodenal homeobox 1
Sequence ID:NM_000209
RefSeqGene ID:NG_008183
Entrez Gene ID:3651
Ensembl ID:ENSG00000139515

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DIABETES MELLITUS, NON-INSULIN-DEPENDENTABCC8
AKT2
CDKAL1
ENPP1
GCGR
GCK
GPD2
HMGA1
HMGA1
HNF1A
HNF1B
HNF4A
IGF2BP2
IL6
IRS1
IRS2
KCNJ11
LIPC
MAPK8IP1
MTNR1B
NEUROD1
NEUROD1
NEUROD1
PAX4
PPARG
PTPN1
RETN
SLC2A4
SLC30A8
TCF7L2
VEGFA
WFS1
WFS1

Cytogenetic Location (from UniGene)

Cytogenetic Location:13q12.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 28494255 - 28499394

NM_000209 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15142849416728494680
51525732849839228500450

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40080548Full LengthBC111592pancreatic and duodenal homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000200  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000209 NP_000200 P52945 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
U30329 AAA74012 P52945
U35632 AAA88820 P52945
AF049893 AAC05157 P52945
BC111592 AAI11593  
X99894 CAA68169 P52945

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDX1 NP_000200 M.musculus Pdx1 18609 Gene Info NP_032840 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

NCI-Nature Pathway Interaction Database