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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHAT, Choline O-acetyltransferase
Sequence ID:NM_001142934
NM_001142933
NM_020549
NM_001142929
NM_020985
NM_020984
NM_020986
RefSeqGene ID:NG_011797
Entrez Gene ID:1103
Ensembl ID:ENSG00000070748

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
MYASTHENIC SYNDROME, CONGENITAL, ASSOCIATED WITH EPISODIC APNEA 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 50822082 - 50873150

 Exon Info From UCSC:
NM_001142934
NM_001142933
NM_020549
NM_001142929
NM_020985
NM_020984
NM_020986

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146646Full LengthBC130615choline acetyltransferase
40146648Full LengthBC130617choline acetyltransferase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_066265  NP_066266  NP_066264  NP_065574  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001142929 NP_001136401    
NM_001142933 NP_001136405    
NM_001142934 NP_001136406    
NM_020549 NP_065574   Carn_acyltransf
NM_020984 NP_066264   Carn_acyltransf
NM_020985 NP_066265   Carn_acyltransf
NM_020986 NP_066266   Carn_acyltransf

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
S56138 AAA14245 P28329 EC 2.3.1.6
S45018 AAB23557 P28329 EC 2.3.1.6
BC130615 AAI30616 P28329 EC 2.3.1.6
BC130617 AAI30618 A2BDF5  
AF305907 AAK08953 P28329 EC 2.3.1.6
AF305908 AAK08954 P28329 EC 2.3.1.6
AF305909 AAK08955 P28329 EC 2.3.1.6
AF450452 AAL48258 Q8WXE3  
HQ258314 ADR83068    
D82339 BAA18943 Q6LEN5  
D82340 BAA18944 Q6LEN6  
D82341 BAA18945 Q6LEN5  
D82342 BAA18946 Q6LEN5  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHAT NP_065574 M.musculus Chat 12647 Gene Info NP_034021 88
R.norvegicus Chat 290567   XP_224626 86
D.melanogaster Cha 42249   NP_477004 42
A.gambiae AgaP_AGAP002370 1273593   XP_312586 41
C.elegans unc-17 177124   NP_001023603 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)