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Gene Info

Gene Information For:Hs. TARDBP, TAR DNA binding protein
Sequence ID:NM_007375
RefSeqGene ID:NG_008734
Entrez Gene ID:23435
Ensembl ID:ENSG00000120948

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
AMYOTROPHIC LATERAL SCLEROSIS 10, WITH OR WITHOUT FTD 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 11084442 - 11085549

NM_007375 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11221107267811072799
1233721107377211074021
3735361107690011077063
5376771107878911078929
6788481108048511080655
84942161108218011085547

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5498250Full LengthBC071657TAR DNA binding protein
30389805Full LengthBC095435TAR DNA binding protein
3506121IncompleteBC001487TAR DNA binding protein
4372646IncompleteBC059955TAR DNA binding protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031401  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007375 NP_031401 Q13148 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
U23731 AAA70033 Q13148
AF311304 AAG47782 Q9H256
BC071657 AAH71657 Q13148
BC095435 AAH95435 Q13148
EF434181 ABO32290 Q13148
EF434182 ABO32291 Q13148
EF434183 ABO32292 Q13148
EU446942 ABZ92471  
AK222754 BAD96474 Q13148
AK312416 BAG35326 Q13148
AK295920 BAG58707 B4DJ45
AK299454 BAG61425 B4DRW3
AL050265 CAB43367 Q13148
CR533534 CAG38565 Q13148
AM392916 CAL37794  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TARDBP NP_031401 M.musculus Tardbp 230908 Gene Info NP_663531 96
A.gambiae AgaP_AGAP003497 1270935   XP_309663 51
D.melanogaster TBPH 37781   NP_726373 51
C.elegans tag-169 174436   NP_001022166 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)