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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ATP13A2, ATPase type 13A2
Sequence ID:NM_022089
NM_001141973
NM_001141974
RefSeqGene ID:NG_009054
Entrez Gene ID:23400
Ensembl ID:ENSG00000159363

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal medulla, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
PARKINSON DISEASE 9 

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 17312456 - 17316220

 Exon Info From UCSC:
NM_022089
NM_001141973
NM_001141974

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5240813Full LengthBC030267ATPase type 13A2
5139467IncompleteBC034575ATPase type 13A2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071372  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001141973 NP_001135445    
NM_001141974 NP_001135446    
NM_022089 NP_071372 Q9NQ11 E1-E2_ATPase
Hydrolase

Related Sequences

 
mRNAGenPeptSwissProt
BC030267 AAH30267 Q9NQ11
BC034575 AAH34575 Q8N4D4
AY461712 AAR23423 Q9NQ11
AY987009 AAX88804 Q52PK6
AK075310 BAC11539 Q8NBS1
AK290210 BAF82899 Q9NQ11
AJ009947 CAA08912 Q9NQ11
AL354615 CAB89728 Q9NQ11
AL833966 CAD38813 Q9NQ11

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ATP13A2 NP_071372 M.musculus Atp13a2 74772 Gene Info NP_083373 86
R.norvegicus Atp13a2 362645   XP_342963 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)