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CCAP BAC Clones

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Chromosome 22


Chromosome 22
Map Coordinate BAC id Placement on genome1 Placement summary3 BAC End2 Insert Sequence2 STS id2
22q11.1d CTA-115F6 chr22 16Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B18171 T7,
B18170 SP6
  D22S137
22q11.21 RP11-91O6 chr22 16Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ282783 T7,
AQ282780 SP6
  
22q11.22a CTA-526G4 chr22 20Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749020 SP6,
BZ749021 T7
  WI-13513+,
WI-362,
stD22S112
22q11.23a CTA-322B1 chr22 22Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B13824 SP6,
B13825 T7
Z84718 WI-7416,
stbK322B1T7
22q11.23c CTA-221G9 chr22 23Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749006 T7,
BZ749005 SP6,
B18023 SP6
Z99916 stbK76C9T7
22q12.1b CTA-992D9 chr22 25Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequenceBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B14155 T7,
B14154 SP6
AL008638 stWI-13238+
22q12.1c CTA-57G9 chr22 27Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B13991 T7,
B18131 T7
Z95116 stD22S991E.1
22q12.2b CTA-99F11   B14164 SP6+   
22q12.3 CTA-221H1 chr22 32Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749008 T7,
B18024 T7,
BZ749007 SP6
AL008717 stW1-355
22q12.3 CTA-415G2 chr22 31Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749016 SP6,
BZ749017 T7
Z83846 stD22S411E
22q12.3d~13.1d CTA-212A2 chr22 34Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749004 T7,
BZ749003 SP6
Z95114 WI-16714,
WI-2,
WI-379,
stcN27A12T3
22q13.1c CTA-390B3 chr22 36Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequenceBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B13894 SP6,
B13895 T7
Z93096 stbK390B3.TP+
22q13.1d CTA-150C2 chr22 37Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B18203 SP6,
B18204 T7
AL022318 stbK236E8TP
22q13.2b CTA-229A8 chr22 39Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749010 T7,
BZ749009 SP6
Z86090 D22S279,
stbK229A8.SP6
22q13.2b~13.2c CTA-250D10 chr22 40Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749011 T7,
B14274 SP6
Z99716 D22S307,
D22S410E,
SGC30242,
WI-12706,
WI-6209,
WI-7665,
stCYP2DP1
22q13.31c~13.31d CTA-397C4 chr22 43Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequenceBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B13909 T7,
B13908 SP6
Z81308 stD22S40+
22q13.31d~13.31e CTA-268H5 chr22 43Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B18070 SP6,
BZ749013 T7,
BZ749012 SP6
AL008718 AFMA151XE9
22q13.31f CTB-109B5 chr22 46Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ748969 SP6,
BZ748970 T7
AL021306 stcN75H12B
22q13.32b CTA-299D3 chr22 47Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B18085 SP6,
BZ749015 T7,
BZ749014 SP6
Z84468 stbK299D3A
22q13.33a CTA-722E9 chr22 48Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information B14046 T7,
B14045 SP6
AL008636 stbK148G1TV
22q13.33b CTA-799F10 chr22 49Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information BZ749023 T7,
BZ749022 SP6
Z82245 WI-8917+,
stD22S163b

1 FISH-mapped clone was placed on the sequenced genome based on BAC-ends, insert sequences and STSs.

2 Sequences that are associated with the clone and used for clone placement.
   * indicates sequences that disagree with data in 'Placement on genome' column.
   + indicates sequences that didn't align to the genome or were not used for annotation.

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation BAC-end sequence aligned in the minus orientation
   no insert sequence and no STS aligned no insert sequence and no STS aligned
   STS aligned STS aligned
   insert sequence insert sequence
   insert sequence and STS aligned insert sequence and STS aligned
   insert sequence has clone end information insert sequence has clone end information.