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CCAP BAC Clones

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Chromosome 15


Chromosome 15
Map Coordinate BAC id Placement on genome1 Placement summary3 BAC End2 Insert Sequence2 STS id2
15q11.2e RP11-373J1 chr15 21Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301786 SP6,
AZ301785 T7
  RH54328
15q12a RP11-307C10 chr15 20Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301243 T7,
AZ301244 SP6
  RH10708
15q12c~13.1a RP11-339C21 chr15 23Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301283 T7,
AZ301284 SP6
  RH39531
15q13.1c~13.2a RP11-414N15 chr15 29Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301255 T7,
AZ301256 SP6
AC130691+ RH77828
15q13.2a~13.2b RP11-438M3 chr15 28Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301257 T7,
AZ301258 SP6
  RH64897
15q13.3a~13.3b RP11-303I17 chr15 28Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301278 SP6,
AZ301277 T7
  RH54447
15q13.3b~13.3c RP11-420B6 chr15 30Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301297 T7,
AZ301298 SP6
  RH74897
15q13.3d RP11-462A2 chr15 33Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301299 T7,
AZ303309 SP6
  RH65444
15q14a RP11-347I18 chr15 32Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ528837 SP6,
AZ301288 SP6,
AQ528838 T7,
AZ301287 T7
  RH54191
15q14c~14d RP11-477P17 chr15 36Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ636714 T7+,
AZ301269 T7,
AQ636712 SP6,
AZ301270 SP6
  RH54151
15q14d~15.1a RP11-415B4 chr15 37Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ547989 SP6+,
AZ301295 T7,
AZ301296 SP6
  RH77893
15q15.1b RP11-555K11 chr15 38Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301303 T7,
AZ301304 SP6
  RH25637
15q15.1b~15.1c RP11-526N6 chr15 39Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301273 T7,
AZ301274 SP6
  RH71140
15q15.1c~15.1d RP11-463B11 chr15 39Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ634911 T7+,
AZ301266 SP6,
AZ301265 T7
  RH54251,
RH71140
15q15.2a~15.2b RP11-402F9 chr15 41Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301789 T7,
AZ301790 SP6
AC009852,
AC087829
RH74787
15q15.3b RP11-315A19 chr15 41Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301311 T7,
AQ538490 SP6,
AZ301312 SP6
AC011330,
AC099821
RH39570
15q21.1a~21.1b RP11-552E10 chr15 45Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301329 T7,
AZ301330 SP6
AC012050,
AC090546
RH79183
15q21.1c RP11-558D7 chr15 46Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301332 SP6,
AZ301331 T7
  RH75088
15q21.2a RP11-294O11 chr15 48Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301781 T7,
AZ301782 SP6
AC009851,
AC087584
RH54318
15q21.2b~21.2c RP11-305H12 chr15 49Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301242 SP6,
AZ301241 T7
  RH54161
15q21.3a~21.3b RP11-315E19 chr15 52Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301247 T7,
AQ538790 SP6,
AZ301248 SP6
  RH54225
15q21.3b~21.3c RP11-460A24 chr15 53Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301264 SP6,
AZ301263 T7
AC016527 RH65629
15q21.3d RP11-323F24 chr15 54Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ544228 SP6,
AZ301784 SP6,
AZ301783 T7
AC010999 RH36930
15q22.1a~22.1b RP11-353J8 chr15 55Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AQ530325 T7+,
AZ301252 SP6,
AZ301251 T7
  RH54291
15q22.2a~22.2b RP11-306H6 chr15 57Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301280 SP6,
AZ301279 T7
  RH54362+
15q22.31b RP11-448B5 chr15 64Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301321 T7,
AZ301322 SP6
  RH44449
15q24.1a~24.1b RP11-500O23 chr15 70Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301222 SP6,
AZ301221 T7
  RH26696,
RH47216
15q24.2a RP11-289H7 chr15 74Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301213 T7,
AZ301214 SP6
  RH17222
15q24.3a RP11-338C8 chr15 75Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301215 T7,
AZ301216 SP6
  RH39460+
15q25.1a~25.1b RP11-558F16 chr15 79Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301230 SP6,
AZ301229 T7
  RH69578
15q25.2a~25.2b RP11-559G12 chr15 80Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationSTS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301276 SP6+,
AZ301275 T7
  RH54250
15q25.2b RP11-402J23 chr15 82Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301219 T7,
AZ301220 SP6
  RH54081
15q25.3a RP11-296P8 chr15 83Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301212 SP6,
AZ301211 T7
  RH54181
15q26.1a RP11-533L13 chr15 86Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301223 T7,
AZ301224 SP6
  RH39486,
RH44907
15q26.1a RP11-538D2 chr15 86Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301225 T7,
AZ301226 SP6
  RH44907
15q26.1b RP11-360F18 chr15 88Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301289 T7,
AZ301290 SP6,
AZ519600 SP6
  RH54255
15q26.1c RP11-378B5 chr15 89Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301319 T7,
AQ534334 SP6,
AZ301320 SP6
  RH39554
15q26.1d RP11-304N14 chr15 90Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationinsert sequence and STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301310+,
AZ301309 T7
AC020563,
AC091580
RH47406
15q26.1e RP11-369O17 chr15 91Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301318 SP6,
AZ301317 T7
  RH26599
15q26.2a~26.2b RP11-337N12 chr15 94Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301950 SP6,
AZ301949 T7
  RH45711
15q26.2c RP11-308P12 chr15 96Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301245 T7,
AZ301246 SP6
  RH47884
15q26.3a RP11-397C10 chr15 97Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301293 T7,
AZ301294 SP6
  RH70207
15q26.3d RP11-530H6 chr15 99Mb insert sequence has clone end informationBAC-end sequence aligned in the plus orientationno insert sequence and no STS alignedBAC-end sequence aligned in the minus orientationinsert sequence has clone end information AZ301328 SP6,
AZ301327 T7
  RH44112

1 FISH-mapped clone was placed on the sequenced genome based on BAC-ends, insert sequences and STSs.

2 Sequences that are associated with the clone and used for clone placement.
   * indicates sequences that disagree with data in 'Placement on genome' column.
   + indicates sequences that didn't align to the genome or were not used for annotation.

3 Placement summary indicates sequences used for clone placement.
   BAC-end sequence aligned in the plus orientation BAC-end sequence aligned in the plus orientation
   BAC-end sequence aligned in the minus orientation BAC-end sequence aligned in the minus orientation
   no insert sequence and no STS aligned no insert sequence and no STS aligned
   STS aligned STS aligned
   insert sequence insert sequence
   insert sequence and STS aligned insert sequence and STS aligned
   insert sequence has clone end information insert sequence has clone end information.